We expect some basic experience with ImageJ/Fiji but NO experience with macro programing / scripting. students, postdocs and technicians who already use ImageJ / Fiji and want to advance their skills in macro programing and scripting. This workshop is equally suited for undergraduate students as well as Ph.D.

Furthermore, there will be ample time to discuss your individual needs and challenges. With this workshop we would like to offer an intermediate level introduction to the ImageJ / Fiji macro programing / scripting for reproducible analysis and automation in digital image processing.įor all major content blocks of the course, you will perform tutorials and apply your newly acquired knowledge in practical hands-on sessions. Thus, ImageJ/Fiji is equally suited for ground-braking new developments and easily accessible established functions. Fiji is a package adding multiple addons and plugins to ImageJ, but works just as wonderfully. New features are constantly being added by the community. It is an open source program, freely available and runs on all operating systems.

ImageJ is probably the most commonly used scientific image data analysis and editing software. Optophysiology – Optogenetics and Neurophysiology.Clinic for Neurology and Neurophysiology.Core Facility Imaging of Materials Systems.Facility for Advanced Imaging and Microscopy.

Imagej scripting